Together with our collaborators, we are actively maintaining the following software packages
1.) SEQMINER for annotating and querying files of sequence variation and summary association statistics
2.) RVTESTS for sequence-based association analysis and meta-analysis for (rare) variants.
3.) RAREMETALWORKER/RAREMETAL/rareMETALS/rareMETALS2 for meta-analysis of gene-level association tests.
4.) rareGWAMA for imputation based GWAS meta-analysis.
5.) XCIR for inferring genes that escape X chromosome inactivation using population scale RNA-seq data
6.) MAMBA for assessing replicability in meta-analyses of genome-wide association studies